FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364714

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364714
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3434
Sequences flagged as poor quality0
Sequence length18-364
%GC39

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG174450.78625509609785No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA124036.1094933022714No Hit
AGAAGTTCTTCATCATTACATGA521.5142690739662201No Hit
TCATGTAATGATGAAGAACTTCT391.1357018054746653No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT300.8736167734420501No Hit
TCATGTATTATATATGAACCATCTGCTTTTAATGATTTTCAGAGGCCAGC230.6697728596389051No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT190.553290623179965No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT180.52417006406523No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTGAACCTCTGGAATGGTATTTAA120.34944670937682004No Hit
AGAAGTTCTTCATCACAGGATGGACCCCAAAGGCTGCTTGTAAACAGAGG100.29120559114735No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC100.29120559114735No Hit
AGAAGTTCTTCATCATTACATG90.262085032032615No Hit
TCATGTAATGATGAAGAACTTC90.262085032032615No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG80.23296447291788003No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTAC70.20384391380314504No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCACCTCA60.17472335468841002No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT60.17472335468841002No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATTCTTGCATCT60.17472335468841002No Hit
TCATGTATTATATGAATGATGGTGTTTATGGCTCTTTTGCAAGTAAACTG50.145602795573675No Hit
TCATGTATTATATGAATGATGGTGTTTATTGGTTCTTTTGCAAGTAAACT40.11648223645894001No Hit
AGAAGTTCTTCATCATTGAGCCTGAAGTAATTCCAGCATCTTGCATCTCA40.11648223645894001No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATCTTGCATCTA40.11648223645894001No Hit
GGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA40.11648223645894001No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTTGCAAGTAAAC40.11648223645894001No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)