FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364715

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364715
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2043
Sequences flagged as poor quality0
Sequence length135-368
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA100549.19236417033774No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG88743.41654429760157No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAAACAGAGGCTCATCTTCCTTG663.2305433186490458No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC60.2936857562408223No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT40.19579050416054822No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAACTGT40.19579050416054822No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG40.19579050416054822No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGTAAACTGT30.14684287812041116No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)