FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364717

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364717
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1640
Sequences flagged as poor quality0
Sequence length82-371
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA76246.463414634146346No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG74045.1219512195122No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTATGAAC382.317073170731707No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT100.6097560975609756No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT70.426829268292683No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTAC70.426829268292683No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT50.3048780487804878No Hit
TCATGTATTAAGCAGCCTTTGGGGTCCATCCTGTGATGAGCTTGATCAAA30.1829268292682927No Hit
TCATGTATTATATGAATGATGGTGTTTACGGTTCTTTTGCAAGTAAACTG30.1829268292682927No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATTCTTGCATCT30.1829268292682927No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCACCTCA20.12195121951219512No Hit
AGAAGTTCTTCATCATTAAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.12195121951219512No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATCTTGCATCTA20.12195121951219512No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCCCA20.12195121951219512No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTCAAGTAAACT20.12195121951219512No Hit
GGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.12195121951219512No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTGCAAGTATGAACC20.12195121951219512No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATTCTTGCATCTA20.12195121951219512No Hit
TCATTGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAA20.12195121951219512No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG20.12195121951219512No Hit
GAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCAT20.12195121951219512No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)