FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364718

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364718
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1306
Sequences flagged as poor quality0
Sequence length214-366
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG61346.93721286370597No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA58644.86983154670751No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT161.2251148545176112No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT90.6891271056661562No Hit
TCATGTATTATAAGGAAGATGAGCCTCTGTTTACAAGCAGCCTTTGGGGT70.5359877488514548No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT40.3062787136294028No Hit
TCATGTATTATATGAATGATGGTATTTATGGTTCTTTTGCAAGTAAACTG30.22970903522205208No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATTCTTGCATCT30.22970903522205208No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC30.22970903522205208No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATTCTTGCATCTC30.22970903522205208No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTTCTTTTGCAAGTAAACT20.1531393568147014No Hit
AGGAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.1531393568147014No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT20.1531393568147014No Hit
TCATGTATTATATGAATGATGGTGTTTATAGTTCTTTTGCAAGTAAACTG20.1531393568147014No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAGACTG20.1531393568147014No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTATACTG20.1531393568147014No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)