FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364719

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364719
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1424
Sequences flagged as poor quality0
Sequence length347-370
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG70449.43820224719101No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA62443.82022471910113No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT241.6853932584269662No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT40.2808988764044944No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG30.21067415730337077No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT30.21067415730337077No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT30.21067415730337077No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCACCTCA20.1404494382022472No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCGTCTCA20.1404494382022472No Hit
TCATGTATTATATGAATGATGGTGCTTATGGTTCTTTTGCAAGTAAACTG20.1404494382022472No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCGAGTAAACTG20.1404494382022472No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCCCA20.1404494382022472No Hit
TCATGTATTATATGAATGACGGTGTTTATGGTTCTTTTGCAAGTAAACTG20.1404494382022472No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTACATCTCA20.1404494382022472No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG20.1404494382022472No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)