FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364720

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364720
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2726
Sequences flagged as poor quality0
Sequence length133-360
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA141852.01760821716801No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG116742.809977989728544No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTCAAGTAAACT110.4035216434336023No Hit
AGAAGTTCTTCATCATTGAGTCTGAGGTAATTCCAGCATCTTGCATCTCA100.36683785766691124No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT60.22010271460014674No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT60.22010271460014674No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTAC60.22010271460014674No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCACCTCA50.18341892883345562No Hit
AAGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTC50.18341892883345562No Hit
TTGGGGTCCATCCTGTGATGAGCTTGATCAAATTGTGGAAAGCTGTCTTC40.1467351430667645No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATCTTGCATCTA40.1467351430667645No Hit
TCGTGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG30.11005135730007337No Hit
AGAAGTTCTTCATCATTGAGTCTGGAGTAATTCCAGCATCTTGCATCTCA30.11005135730007337No Hit
TCATGTATTATATGAATGGTGGTGTTTATGGTTCTTTTGCAAGTAAACTG30.11005135730007337No Hit
TCATGTATTATATGAATGACGGTGTTTATGGTTCTTTTGCAAGTAAACTG30.11005135730007337No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)