FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364721

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364721
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1427
Sequences flagged as poor quality0
Sequence length58-361
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA64945.48002803083392No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG61543.09740714786265No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAATGATGAAGAACTTCT281.9621583742116329No Hit
AGAAGTTCTTCATCATTACTTGCAAAAGAACCATAAACACCATCATTCATATAATACATGA271.89208128941836No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT181.261387526278907No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT70.4905395935529082No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT70.4905395935529082No Hit
AGAAGTTCTTCATCAATGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA60.42046250875963564No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATCTTGCATCTA40.2803083391730904No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT30.21023125437981782No Hit
AGAAGTTCTTCATCATTACTTGCAAAGAACCATAAACACCATCATTCATATAATACATGA30.21023125437981782No Hit
CCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG30.21023125437981782No Hit
TTCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACT20.1401541695865452No Hit
TCATGTATTATATGAATGATGGTGCTTATGGTTCTTTTGCAAGTAAACTG20.1401541695865452No Hit
TCATGTATTATATGAATGATGGTGTTTATACTTCTTTTGCAAGTAAACTG20.1401541695865452No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGTAAACTGT20.1401541695865452No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTAC20.1401541695865452No Hit
GGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.1401541695865452No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAATGATGAAGAACTTC20.1401541695865452No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG20.1401541695865452No Hit
AGAAGTTCTTCATCATTACTTGCAAAAGAACCATAAACACCATCATTCATATAATACATG20.1401541695865452No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)