FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364722

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364722
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2757
Sequences flagged as poor quality0
Sequence length134-366
%GC38

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA146052.956111715632936No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG115041.712005803409504No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT220.797968806673921No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT100.3627130939426913No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTAC100.3627130939426913No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATCTTGCATCTA60.2176278563656148No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT60.2176278563656148No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATTCTTGCATCT40.14508523757707653No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC40.14508523757707653No Hit
AGAAGTTCTTCATCATTGAGCCTGAAGTAATTCCAGCATCTTGCATCTCA30.1088139281828074No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGTAAACTGT30.1088139281828074No Hit
AGAGGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA30.1088139281828074No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)