FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364723

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364723
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1992
Sequences flagged as poor quality0
Sequence length135-365
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA89444.87951807228915No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG80640.46184738955823No Hit
AGAAGTTCTTCATCACAGGATGGACCCCAAAGGCTGCTTGTAAACAGAGG1306.526104417670683No Hit
TCATGTATTATATGGATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG412.0582329317269075No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT110.5522088353413654No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC60.30120481927710846No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT60.30120481927710846No Hit
AGAAGTTCTTCATCACAGGATGGACCCAAAGGCTGCTTGTAAACAGAGGC50.25100401606425704No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT40.2008032128514056No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAACTGT40.2008032128514056No Hit
AGAAGTTCTTCATCATTGAGTCTGAGGTAATTCCAGCATCTTGCATCTCA30.15060240963855423No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAACATCTTGCATCTCA30.15060240963855423No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTCAAGTAAACT30.15060240963855423No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATTTTGCATCTCA30.15060240963855423No Hit
TCTCCCACATTCAGCTCAGGAAGAAGACAGCTTTCCACAATTTGATCAAG30.15060240963855423No Hit
AGAAGTTCTTCATCACAGGATGGACTCCAAAGGCTGCTTGTAAACAGAGG20.1004016064257028No Hit
TCATGTATTATATGAATGATGGTGTTTACGGTTCTTTTGCAAGTAAACTG20.1004016064257028No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGTATCTTGCATCTCA20.1004016064257028No Hit
AGAAGTTCTTCATCATTGAGTCTGGAGTAATTCCAGCATCTTGCATCTCA20.1004016064257028No Hit
AGAAGTTCCTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.1004016064257028No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCGGCATCTTGCATCTCA20.1004016064257028No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)