FastQCFastQC Report
Tue 7 May 2024
EGAF00000364724

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364724
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1468
Total Bases256.5 kbp
Sequences flagged as poor quality0
Sequence length131-363
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG71948.97820163487738No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA66445.23160762942779No Hit
AGAAATTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA201.3623978201634876No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT60.4087193460490463No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTCAAGTAAACT50.3405994550408719No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT30.20435967302452315No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCACCTTGCATCTCA30.20435967302452315No Hit
TTCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACT30.20435967302452315No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC30.20435967302452315No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTA30.20435967302452315No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT30.20435967302452315No Hit
AGAAGTTCTTCACCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.13623978201634876No Hit
AGAAGTTCTTCATCATTGAGTACTGAAGTAATTCCAGCATCTTGCATCTC20.13623978201634876No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGTAAACTGT20.13623978201634876No Hit
AGAAGTTCTTCATCATTGAGTACTGAAGTAATTCCAGCATCTTGCATACT20.13623978201634876No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAACTGT20.13623978201634876No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT20.13623978201634876No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)