FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364726

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364726
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1560
Sequences flagged as poor quality0
Sequence length99-373
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG66342.5No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA65441.92307692307693No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTGGAATGGTATTTAAGTCCTCAG1419.038461538461538No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT110.7051282051282052No Hit
AGAAGTTCTTCATCATTAAGCCAATCTCCCACATTCAGCTCAGGAAGAAG100.641025641025641No Hit
TCATGTATTATATGAATGATGGTGTTTACGGTTCTTTTGCAAGTAAACTG40.2564102564102564No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC40.2564102564102564No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT40.2564102564102564No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG30.19230769230769232No Hit
AGAAGACAGCTTTTCCGCAATTTGATCAAGCTCATCACAGGATGGACCCC30.19230769230769232No Hit
AGAAGTTCTTCATCGTTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA30.19230769230769232No Hit
TCATGTATTATATGAATGATGGTATTTATGGTTCTTTTGCAAGTAAACTG20.1282051282051282No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTTCTTTTGCAAGTAAACT20.1282051282051282No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCACCTCA20.1282051282051282No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCCCA20.1282051282051282No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC20.1282051282051282No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG20.1282051282051282No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)