FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364727

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364727
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1193
Sequences flagged as poor quality0
Sequence length347-366
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA58248.78457669740151No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG54745.85079631181894No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT90.7544006705783739No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT50.4191114836546521No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT40.3352891869237217No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAAGTAAACT40.3352891869237217No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCAATCTC40.3352891869237217No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATTTTGCATCTCA30.2514668901927913No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC30.2514668901927913No Hit
AGAAGTTCTTCATCGTTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.16764459346186086No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC20.16764459346186086No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTGATTCCAGCATCTTGCATCTCA20.16764459346186086No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)