FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364728

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364728
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1461
Sequences flagged as poor quality0
Sequence length127-363
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA68146.61190965092403No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG63743.60027378507871No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAAGCCAATCTCCCACATTCAGC322.190280629705681No Hit
TCATGTATTATACAAGCAGCCTTTGGGGTCCATCCTGTGATGAGCTTGAT191.3004791238877482No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT151.0266940451745379No Hit
TTGGGGTCCATCCTGTGATGAGCTTGATCAAATTGTGGAAAGCTGTCTTC60.41067761806981523No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT60.41067761806981523No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTAAGTAAACTG40.2737850787132101No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC30.20533880903490762No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT30.20533880903490762No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC30.20533880903490762No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTTCTTTTGCAAGTAAACT20.13689253935660506No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTTCAGCATCTTGCATCTCA20.13689253935660506No Hit
AGAAGTTCTTCATCATTGAGCCTGAAGTAATTCCAGCATCTTGCATCTCA20.13689253935660506No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCAATCTC20.13689253935660506No Hit
AGAAGTTCTTCATCATTAAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.13689253935660506No Hit
AGAAGTTCTTCATCACTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.13689253935660506No Hit
TCATGTATTATATGAATGATGGTGTTTATGGCTCTTTTGCAAGTAAACTG20.13689253935660506No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGTAAACTGT20.13689253935660506No Hit
GGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.13689253935660506No Hit
TCATGTATTATATGAATGATGTGTTTATGGTTCTTTTGCAAGTAAACTGT20.13689253935660506No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAATAAACTG20.13689253935660506No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)