FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364729

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364729
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1422
Sequences flagged as poor quality0
Sequence length84-372
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG64245.14767932489451No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA63844.86638537271448No Hit
TCATGTATTATTACATGATGTCATTCAGTGATTGGTATGAGATGCAAGAT553.8677918424753868No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG80.5625879043600562No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT80.5625879043600562No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC80.5625879043600562No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT70.49226441631504925No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT60.42194092827004215No Hit
TCATGTATTATATGAATGATGGCGTTTATGGTTCTTTTGCAAGTAAACTG30.21097046413502107No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC30.21097046413502107No Hit
AGAAGTTCTTCATCATTGAGTTCTGAAGTAATTCCAGCATCTTGCATCTC20.14064697609001406No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACCG20.14064697609001406No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATTTCA20.14064697609001406No Hit
AGAAGTTCTTCATCATTGAAGTCTGAAGTAATTCCAGCATCTTGCAATCT20.14064697609001406No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)