FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364731

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364731
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3793
Sequences flagged as poor quality0
Sequence length134-364
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA189649.986817822304246No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG161542.57843395728975No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCTCATCACAGGATG681.7927761666227262No Hit
TCATGTATTATACGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG160.4218296862641709No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTCAAGTAAACT140.3691009754811495No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC110.29000790930661746No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT90.23727919852359608No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT80.21091484313208544No Hit
AGAAGTTCTTCATCATTGAGCCTGAAGTAATTCCAGCATCTTGCATCTCA80.21091484313208544No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT60.15818613234906406No Hit
GGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA50.1318217769575534No Hit
TTCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACT40.10545742156604272No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCAATCTC40.10545742156604272No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGTATCTTGCATCTCA40.10545742156604272No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGTAAACTGT40.10545742156604272No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG40.10545742156604272No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)