FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364732

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364732
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1422
Sequences flagged as poor quality0
Sequence length132-364
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA72751.125175808720115No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG62243.741209563994374No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT110.7735583684950774No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT70.49226441631504925No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAAGTAAACT20.14064697609001406No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC20.14064697609001406No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCACCTCA20.14064697609001406No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT20.14064697609001406No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATTTCA20.14064697609001406No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTCAAGTAAACT20.14064697609001406No Hit
TCATGTATTATATGAATGACGGTGTTTATGGTTCTTTTGCAAGTAAACTG20.14064697609001406No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAGCTG20.14064697609001406No Hit
TCATGTATTATATGGATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG20.14064697609001406No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAAAC20.14064697609001406No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)