FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364733

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364733
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2585
Sequences flagged as poor quality0
Sequence length134-361
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA134151.8762088974855No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG111643.172147001934235No Hit
TTGGGGTCCATCCTGTGATGAGCTTGATCAAATTGTGGAAAGCTGTCTTC70.27079303675048355No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC60.23210831721470018No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT50.19342359767891684No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT40.15473887814313345No Hit
GGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA40.15473887814313345No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTA30.11605415860735009No Hit
AGAAGTTCTTTATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA30.11605415860735009No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT30.11605415860735009No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTCAAGTAAACT30.11605415860735009No Hit
AGAGGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA30.11605415860735009No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)