FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364734

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364734
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1559
Sequences flagged as poor quality0
Sequence length137-362
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG77649.775497113534314No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA64941.629249518922386No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT201.2828736369467608No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT130.8338678640153944No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC90.5772931366260423No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT70.4490057729313663No Hit
AGAAGTTCTTCATCATTGAGCCTGAAGTAATTCCAGCATCTTGCATCTCA40.2565747273893521No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG30.19243104554201412No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCACCTCA30.19243104554201412No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAACTGT30.19243104554201412No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTTGCAAGTAAAC30.19243104554201412No Hit
TTCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACT20.12828736369467605No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAAGTAAACT20.12828736369467605No Hit
TCATGTATTATATGAATGATGGTGCTTATGGTTCTTTTGCAAGTAAACTG20.12828736369467605No Hit
AGAAAGCCAATCTCCCACATTCAGCTCAGGAAGAAGACAGCTTTCCACAA20.12828736369467605No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT20.12828736369467605No Hit
AGAAGTTCTCCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.12828736369467605No Hit
AGAAGTTCTTCATCATTGGGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.12828736369467605No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTTAATTCCAGCATCTTGCATCTC20.12828736369467605No Hit
TCATGTTAGTTATATGAATGATGGTGTTTATTGGTTCTTTTGCAAGTAAA20.12828736369467605No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTACAAGTAAACTG20.12828736369467605No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)