FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364735

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364735
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1367
Sequences flagged as poor quality0
Sequence length138-365
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG72452.96269202633505No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA54639.94147768836869No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT181.3167520117044622No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT90.6583760058522311No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC50.36576444769568395No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT50.36576444769568395No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT40.2926115581565472No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC40.2926115581565472No Hit
TCATGTATTATATGAATGATGGTGCTTATGGTTCTTTTGCAAGTAAACTG20.1463057790782736No Hit
AGAAGTTCTTCATTATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.1463057790782736No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAGCTG20.1463057790782736No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTTGCAAGTAAAC20.1463057790782736No Hit
TCATTGGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAA20.1463057790782736No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)