FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364740

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364740
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1564
Sequences flagged as poor quality0
Sequence length137-374
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG81652.17391304347826No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA61639.38618925831202No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT171.0869565217391304No Hit
TCATGTCAAATTGTGGAAAGCTGTCTTCTTCCTGAGCTGAATGTGGGAGA120.7672634271099744No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT90.5754475703324808No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG60.3836317135549872No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC50.319693094629156No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT50.319693094629156No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTTGCAAGTAAAC50.319693094629156No Hit
CCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG40.2557544757033248No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCAATCTC30.1918158567774936No Hit
AGAAGTTCTTTATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA30.1918158567774936No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT30.1918158567774936No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC30.1918158567774936No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGAATCTTGCATCTCA20.1278772378516624No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCGTCTCA20.1278772378516624No Hit
TCATGTATTATATGAATAAGCAGCCTTTGGGGTCCATCCTGTGATGAGCT20.1278772378516624No Hit
TCATGTATTATATGAATGATGGTGTTTATAGTTCTTTTGCAAGTAAACTG20.1278772378516624No Hit
TCATGTATTATATGAATGATGGTGTTTATTGGTTCTTTTGCAAGTAAAAC20.1278772378516624No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGTAAACTGT20.1278772378516624No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTCAAGTAAACT20.1278772378516624No Hit
TCATGTGTTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG20.1278772378516624No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTCCTTTTGCAAGTAAACTG20.1278772378516624No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCGGCATCTTGCATCTCA20.1278772378516624No Hit
TCATGTATTATATGAATGATGGTGTTTATTGGTTCTTTTGCAAGTAAACT20.1278772378516624No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG20.1278772378516624No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)