FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364741

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364741
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1757
Sequences flagged as poor quality0
Sequence length134-361
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG84147.865680136596474No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA80845.987478656801365No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCCAC170.9675583380762665No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT130.7398975526465565No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT60.3414911781445646No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC50.28457598178713717No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTCAAGTAAACT30.1707455890722823No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT30.1707455890722823No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAGTTCCAGCATCTTGCATCTCA20.11383039271485487No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAAGTAAACT20.11383039271485487No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCACCTCA20.11383039271485487No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTTCAGCATCTTGCATCTCA20.11383039271485487No Hit
TCATGTATTATATGAATGATGGTGCTTATGGTTCTTTTGCAAGTAAACTG20.11383039271485487No Hit
TCATGTATTATAAGAAATACAAGGAAGATGAGCCTCTGTTTACAAGCAGC20.11383039271485487No Hit
AGAAGTTCTTCATCATTGAGTACTGAAGTAATTCCAGCTATCTTGCATAC20.11383039271485487No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCGGCATCTTGCATCTCA20.11383039271485487No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCCTGCATCTCA20.11383039271485487No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC20.11383039271485487No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)