FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364742

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364742
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1068
Sequences flagged as poor quality0
Sequence length18-359
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA25724.06367041198502No Hit
AGAAGTTCTTCATCATTACATGA17616.479400749063668No Hit
TCATGTATTATACATGATGTCATTCAGTGATTGGTATGAGATGCAAGATG16115.0749063670412No Hit
TCATGTAATGATGAAGAACTTCT15114.138576779026218No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG12511.704119850187265No Hit
AGAAGTTCTTCATCATTACATGAA504.681647940074907No Hit
TCATGTAATGATGAAGAACTTC474.400749063670412No Hit
AGAAGTTCTTCATCATTACATG191.7790262172284643No Hit
TCATGTAATGATGAAGAACTT100.9363295880149813No Hit
TCATGTAATGATGAAGAACTTCTT70.6554307116104869No Hit
AGAAGTTCTTCATCATTACAT40.37453183520599254No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCCCA40.37453183520599254No Hit
TCATGTAATGATGAAGAACT30.2808988764044944No Hit
TCATGTAATGATGAGAAC30.2808988764044944No Hit
TCATGTATTATACATGATGCCATTCAGTGATTGGTATGAGATGCAAGATG30.2808988764044944No Hit
TCATGTAATGATGAGAACT20.18726591760299627No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC20.18726591760299627No Hit
AGAAGTTCTTCATCATTACATGAAG20.18726591760299627No Hit
TCATGTATTATATGAATGATGGCGTTTATGGTTCTTTTGCAAGTAAACTG20.18726591760299627No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCCTGCATCTCA20.18726591760299627No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)