FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364744

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364744
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1400
Sequences flagged as poor quality0
Sequence length82-362
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA64345.92857142857143No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG57541.07142857142857No Hit
TCATTTATTACATGATGTCATTCAGTGATTGGTATGAGATGCAAGATGCT473.357142857142857No Hit
TCATGAACCATCTGCTTTTAATGATTTTCAGAGGCCAGCCATTTATTACA261.8571428571428572No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT141.0No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT70.5No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT60.4285714285714286No Hit
TCAAGCAGCCTTTGGGGTCCATCCTGTGATGAGCTTGATCAAATTGTGGA50.35714285714285715No Hit
TCATGTATTATACAAGGAAGATGAGCCTCTGTTTACAAGCAGCCTTTGGG30.2142857142857143No Hit
TCAAGCAGCCTTTGGGGTCCATCCTGTGATGAGCTTGATCAAAATTGTGG30.2142857142857143No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC30.2142857142857143No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCG30.2142857142857143No Hit
TCATGAACCATCTGCTTTAATGATTTTCAGAGGCCAGCCATTTATTACAT30.2142857142857143No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC20.14285714285714285No Hit
AGAAGTTCTCCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.14285714285714285No Hit
AGAAGTTCTTTATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.14285714285714285No Hit
TCATGGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAA20.14285714285714285No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAACATCTTGCATCTCA20.14285714285714285No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCTATCTTGCATACT20.14285714285714285No Hit
TCATGTATTATATGAATGATGGTGTTTATTGGTTCTTTTGCAAGTAAACT20.14285714285714285No Hit
CCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG20.14285714285714285No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)