FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364745

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364745
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1592
Sequences flagged as poor quality0
Sequence length96-368
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG75047.11055276381909No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA65641.20603015075377No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTAAGCCAAT211.3190954773869346No Hit
TCATGTAAATTGTGGAAAGCTGTCTTCTTCCTGAGCTGAATGTGGGAGAT211.3190954773869346No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT140.8793969849246231No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT100.628140703517588No Hit
TCATGTATTATCAAATTGTGGAAAGCTGTCTTCTTCCTGAGCTGAATGTG100.628140703517588No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT90.5653266331658292No Hit
TCAAGAAATACAAGGAAGATGAGCCTCTGTTTACAAGCAGCCTTTGGGGT70.4396984924623116No Hit
AGAAGTTCTTCATCATTATCTCCCACATTCAGCTCAGGAAGAAGACAGCT60.37688442211055273No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC40.25125628140703515No Hit
TTGGGGTCCATCCTGTGATGAGCTTGATCAAATTGTGGAAAGCTGTCTTC40.25125628140703515No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTCAAGTAAACT40.25125628140703515No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC40.25125628140703515No Hit
TCATGTATTATATGAATGATGGTGTTTATTGGTTCTTTTGCAAGTAAACT40.25125628140703515No Hit
AGAAGTTCTTCATCATTGAATCTGAAGTAATTCCAGCATCTTGCATCTCA30.18844221105527637No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAAGTAAACT30.18844221105527637No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTTGCAAGTAAAC30.18844221105527637No Hit
TCATGTATTATATGAATGATGGCGTTTTATGGTTCTTTTGCAAGTAAACT20.12562814070351758No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG20.12562814070351758No Hit
AGAAGTTCTTCATCGTTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.12562814070351758No Hit
GGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.12562814070351758No Hit
TCATGTATTATATGAATGACGGTGTTTATGGTTCTTTTGCAAGTAAACTG20.12562814070351758No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG20.12562814070351758No Hit
AGAAGTTCTTCATCATTGAGCCTGAAGTAATTCCAGCATCTTAAGCCAAT20.12562814070351758No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)