FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364746

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364746
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1422
Sequences flagged as poor quality0
Sequence length58-404
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG64045.0070323488045No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA60842.75668073136428No Hit
TCATGTATTATGAGATGCAAGATGCTGGAATTACTTCAGACTCAATGATGAAGAACTTCT251.7580872011251758No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT171.1954992967651195No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCATAATACATGA171.1954992967651195No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG80.5625879043600562No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC70.49226441631504925No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT60.42194092827004215No Hit
TCATGTATGAACCATCTGCTTTTAATGATTTTCAGAGGCCAGCCATTTAT50.35161744022503516No Hit
TCATGTATTATGAGATGCAAGATGCTGGAATTACTTCAGACTCAATGATGAAGAACTTC40.2812939521800281No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTTGCAAGTAAAC40.2812939521800281No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT30.21097046413502107No Hit
TCATGTATTATATGAATGATGATGTTTATGGTTCTTTTGCAAGTAAACTG20.14064697609001406No Hit
AGAAGTTCTTCACCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.14064697609001406No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAAGTAAACT20.14064697609001406No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCAATCTC20.14064697609001406No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTGAACTG20.14064697609001406No Hit
TCATGTATTATGAGATGCAAGATGCTGGAATTACTTCAGACTCAATGATGAAGAACTT20.14064697609001406No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTTCATGGAAAGAATCTGCTCCCA20.14064697609001406No Hit
AGAAGTTCTTCATCATTGGGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.14064697609001406No Hit
AGAAGTTCTTCATCATTGATCAAGCTCATCACAGGATGGACCCCAAAGGC20.14064697609001406No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)