FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364747

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364747
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2965
Sequences flagged as poor quality0
Sequence length130-356
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA158753.52445193929174No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG125342.25969645868465No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC80.26981450252951095No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTCAAGTAAACT70.2360876897133221No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT60.2023608768971332No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT60.2023608768971332No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT40.13490725126475547No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTAAGTAAACTG40.13490725126475547No Hit
AGAAGTTCTTCATCATTGAGTCCGAAGTAATTCCAGCATCTTGCATCTCA30.1011804384485666No Hit
AGAAGTTCTTCATCGTTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA30.1011804384485666No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAACTGT30.1011804384485666No Hit
CCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG30.1011804384485666No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)