FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364748

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364748
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1575
Sequences flagged as poor quality0
Sequence length33-365
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG78449.77777777777778No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA61338.920634920634924No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAAACATGA311.9682539682539684No Hit
TCATGTTTACTTCAGACTCAATGATGAAGAACTTCT301.9047619047619049No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT150.9523809523809524No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT90.5714285714285714No Hit
TCATGTTTACTTCAGACTCAATGATGAAGAACTTC80.5079365079365079No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT50.31746031746031744No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC40.25396825396825395No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG40.25396825396825395No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTTGCAAGTAAAC30.19047619047619047No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT20.12698412698412698No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAAACATGAA20.12698412698412698No Hit
TCATGTACTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG20.12698412698412698No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATCTTGCATCTC20.12698412698412698No Hit
TCATGTATTATATGAATGATGGTGTTTATTGGTTCTTTTGCAAGTAAACT20.12698412698412698No Hit
AGAAGTTCTTCATCATTGAGTCTAAAGTAATTCCAGCATCTTGCATCTCA20.12698412698412698No Hit
TCATGTTTACTTCAGACTCAATGATGAAGAACTT20.12698412698412698No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)