FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364749

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364749
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1902
Sequences flagged as poor quality0
Sequence length136-364
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG90847.73922187171398No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA87145.79390115667718No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT150.7886435331230284No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT60.31545741324921134No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC60.31545741324921134No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT50.26288117770767616No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAAGTAAACT40.2103049421661409No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATCTTGCATCTA40.2103049421661409No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTAC40.2103049421661409No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCACCTCA30.15772870662460567No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATTCTTGCATCT30.15772870662460567No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCTCATCACAGGATG30.15772870662460567No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCCCA30.15772870662460567No Hit
AGAAGTTCTTCATCGTTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA30.15772870662460567No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTTGCAAGTAAAC30.15772870662460567No Hit
AGAAGTTTTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.10515247108307045No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAATTG20.10515247108307045No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTTCTTTTGCAAGTAAACT20.10515247108307045No Hit
TTATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG20.10515247108307045No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT20.10515247108307045No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTCAAGTAAACT20.10515247108307045No Hit
TCATGTATTATATGAATGATGGCGTTTATGGTTCTTTTGCAAGTAAACTG20.10515247108307045No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTAAGTAAACTG20.10515247108307045No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATTCTTGCATCTA20.10515247108307045No Hit
TCATGTATTATATGAATGATGGTGTTTATTGGTTCTTTTGCAAGTAAACT20.10515247108307045No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG20.10515247108307045No Hit
AGAAGTTCTTCGTCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.10515247108307045No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)