FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364750

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364750
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1452
Sequences flagged as poor quality0
Sequence length41-366
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG74851.515151515151516No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA52536.15702479338843No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGT291.997245179063361No Hit
ACTTGCAAAAGAACCATAAACACCATCATTCATATAATACATGA231.5840220385674932No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT151.0330578512396695No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT110.7575757575757576No Hit
ACTTGCAAAAGAACCATAAACACCATCATTCATATAATACATG50.34435261707988984No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG50.34435261707988984No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG50.34435261707988984No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT40.27548209366391185No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTAC40.27548209366391185No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT30.2066115702479339No Hit
TCATGTATTATGTGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG30.2066115702479339No Hit
TCATGTATTATATGAATGATGGTATTTATGGTTCTTTTGCAAGTAAACTG20.13774104683195593No Hit
TCATGTATTATATGAATGATGGTTGTTTATGGTTCTTTTGCAAGTAAACT20.13774104683195593No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAAGTAAACT20.13774104683195593No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTA20.13774104683195593No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATTCTTGCATCT20.13774104683195593No Hit
ACTTGCAAAAGAACCATAAACACCATCATTCATATAATACAT20.13774104683195593No Hit
AGCAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.13774104683195593No Hit
AGAAGTTCTTCATCATTGGGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.13774104683195593No Hit
AGAAGCTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.13774104683195593No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAATAAACTG20.13774104683195593No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTTGCAAGTAAAC20.13774104683195593No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC20.13774104683195593No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAG20.13774104683195593No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)