FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364751

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364751
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1640
Sequences flagged as poor quality0
Sequence length81-365
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG77147.012195121951216No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA72844.390243902439025No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT231.402439024390244No Hit
TCATATTACATGATGTCATTCAGTGATTGGTATGAGATGCAAGATGCTGG120.7317073170731708No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT70.426829268292683No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC60.3658536585365854No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTTTATTA60.3658536585365854No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG50.3048780487804878No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT40.24390243902439024No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCCTGCATCTCA40.24390243902439024No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAGTTCCAGCATCTTGCATCTCA30.1829268292682927No Hit
AGAAGTTCTTCATCATTGAGTACTGAAGTAATTCCAGCATCTTGCATACT30.1829268292682927No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT30.1829268292682927No Hit
TCATGTATTATATGAATGATGGTGTTTATTGGTTCTTTTGCAAGTAAACT30.1829268292682927No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGTATTTCT20.12195121951219512No Hit
AGAAGTTCTTCATTATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.12195121951219512No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCAATCTC20.12195121951219512No Hit
AGAAGTTCTTCATCATTGAGTCTGAAATAATTCCAGCATCTTGCATCTCA20.12195121951219512No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGTATCTTGCATCTCA20.12195121951219512No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATTTTGCATCTCA20.12195121951219512No Hit
GGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.12195121951219512No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAGCTG20.12195121951219512No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGTATCTCA20.12195121951219512No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)