Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000505088 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5600496 |
Total Bases | 285.6 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGATCATCTCGTATGC | 39086 | 0.6979024714953819 | TruSeq Adapter, Index 7 (100% over 50bp) |
ACTAGTATGGCCCGGGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATA | 8088 | 0.14441578031660052 | No Hit |
ACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACGTAGAACTCAATCT | 7980 | 0.1424873796892275 | No Hit |
GGGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACCCTTTAAGAGT | 7482 | 0.1335953101296742 | No Hit |
ACTGGATGCATCTGCAGGATATCGCGGCCGCCATCTGCCCTACGTTTGAG | 6886 | 0.12295339555639358 | No Hit |
GGGCCATACTAGTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACG | 6853 | 0.12236416203136294 | No Hit |
ACTAGTATGGCCCGGGGGATCCTTATCTGTCAAAACCGCTAATGTCCGTT | 6359 | 0.1135435147172679 | No Hit |
TCTGCAGGATATCGCGGCCGCCATCTGCCCTACGTTTGAGGGTTATAAGC | 5831 | 0.10411577831677765 | No Hit |