FastQCFastQC Report
Thu 16 Mar 2023
EGAF00000510298

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000510298
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences66800023
Sequences flagged as poor quality0
Sequence length90
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGAATGCTGGAGATTGTAATGGGTATGGAGACATATCATATAAGTAAT1266960.18966460535500115No Hit
GGCGGATGAAGCAGATAGTGAGGAAAGTTGAGCCAATAATGACGTGAAGT890310.13327989422997655No Hit
CATTTCTCTAACAGCAGTAATATTAATAATTTTCATGATTTGAGAAGCCT764610.11446253543954618No Hit
GTATAATACTAAGTTGAGATGATATCATTTACGGGGGGAAGGCGCTTTGT741510.11100445279786804No Hit
GTGGGTATAATACTAAGTTGAGATGATATCATTTACGGGGGGAAGGCGCT732520.1096586448780115No Hit
ATAATTTTCATGATTTGAGAAGCCTTCGCTTCGAAGCGAAAAGTCCTAAT709600.10622750833483995No Hit
GTTCGATTCCTTCCTTTTTTGTCTAGATTTTATGTATACGGGTTCTTCGA704070.10539966430849883No Hit
CTCTGTGCTAGTAACCACGTTCTCCTGATCAAATATCACTCTCCTACTTA687970.10298948549763223No Hit
GGGGGTTCGATTCCTTCCTTTTTTGTCTAGATTTTATGTATACGGGTTCT671940.10058978572507378No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)