FastQCFastQC Report
Thu 16 Mar 2023
EGAF00000510299

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000510299
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences66800023
Sequences flagged as poor quality0
Sequence length90
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGAATGCTGGAGATTGTAATGGGTATGGAGACATATCATATAAGTAAT1119660.16761371474378087No Hit
GGCGGATGAAGCAGATAGTGAGGAAAGTTGAGCCAATAATGACGTGAAGT971960.14550294391365703No Hit
GGGGGTTCGATTCCTTCCTTTTTTGTCTAGATTTTATGTATACGGGTTCT828640.12404786148052674No Hit
GTGGGTATAATACTAAGTTGAGATGATATCATTTACGGGGGGAAGGCGCT779640.11671253466484584No Hit
GTTCGATTCCTTCCTTTTTTGTCTAGATTTTATGTATACGGGTTCTTCGA773140.11573948110766367No Hit
GGGGAAGGCGCTTTGTGAAGTAGGCCTTATTTCTCTTGTCCTTTCGTACA702880.10522152065726084No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)