FastQCFastQC Report
Tue 7 Mar 2023
EGAF00000510314

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000510314
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences71392985
Sequences flagged as poor quality0
Sequence length90
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGTTCGATTCCTTCCTTTTTTGTCTAGATTTTATGTATACGGGTTCT1308710.18331072723741695No Hit
GTTCGATTCCTTCCTTTTTTGTCTAGATTTTATGTATACGGGTTCTTCGA1288780.18051913643896525No Hit
GGGGAATGCTGGAGATTGTAATGGGTATGGAGACATATCATATAAGTAAT1248160.1748295018060948No Hit
GGCGGATGAAGCAGATAGTGAGGAAAGTTGAGCCAATAATGACGTGAAGT1118760.15670447173486302No Hit
GGGTGAGGTAAAATGGCTGAGTGAAGCATTGGACTGTAAATCTAAAGACA844590.11830153900975005No Hit
GGGGCATCCATATAGTCACTCCAGGTTTATGGAGGGTTCTTCTACTATTA836960.11723280655655455No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA835710.11705771932634557No Hit
CATTTCTCTAACAGCAGTAATATTAATAATTTTCATGATTTGAGAAGCCT786560.11017328943452918No Hit
GTATAATACTAAGTTGAGATGATATCATTTACGGGGGAAGGCGCTTTGTG781100.10940850841297642No Hit
GGGTTCGATTCCTTCCTTTTTTGTCTAGATTTTATGTATACGGGTTCTTC752290.10537309793112026No Hit
ATAATTTTCATGATTTGAGAAGCCTTCGCTTCGAAGCGAAAAGTCCTAAT740270.10368945912543087No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)