FastQCFastQC Report
Thu 16 Mar 2023
EGAF00000510324

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000510324
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences70651334
Sequences flagged as poor quality0
Sequence length90
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4379240.6198382609449384No Hit
GGGTGAGGTAAAATGGCTGAGTGAAGCATTGGACTGTAAATCTAAAGACA2433690.3444648334594786No Hit
GTTCGATTCCTTCCTTTTTTGTCTAGATTTTATGTATACGGGTTCTTCGA2300660.3256357480808501No Hit
GGGGGTTCGATTCCTTCCTTTTTTGTCTAGATTTTATGTATACGGGTTCT2081270.29458325585189943No Hit
GGGTGCTATAGGGTAAATACGGGCCCTATTTCAAAGATTTTTAGGGGAAT1819170.25748558406554645No Hit
CATTTCTCTAACAGCAGTAATATTAATAATTTTCATGATTTGAGAAGCCT1524500.2157779497836516No Hit
GTATAATACTAAGTTGAGATGATATCATTTACGGGGGAAGGCGCTTTGTG1502220.2126244353715954No Hit
GGGGAATGCTGGAGATTGTAATGGGTATGGAGACATATCATATAAGTAAT1443760.2043499985435519No Hit
ATTTGAGAAGCCTTCGCTTCGAAGCGAAAAGTCCTAATAGTAGAAGAACC1332510.1886036575048958No Hit
ATAATTTTCATGATTTGAGAAGCCTTCGCTTCGAAGCGAAAAGTCCTAAT1317820.18652443278707234No Hit
GGGTTCGATTCCTTCCTTTTTTGTCTAGATTTTATGTATACGGGTTCTTC1203580.17035488671735483No Hit
GTGGGTATAATACTAAGTTGAGATGATATCATTTACGGGGGAAGGCGCTT1155620.16356662140307215No Hit
GCCATGGGGTTGGCTTGAAACCAGCTTTGGGGGGTTCGATTCCTTCCTTT1141060.16150579690399053No Hit
GTTGGCTTGAAACCAGCTTTGGGGGGTTCGATTCCTTCCTTTTTTGTCTA1127090.1595284810899678No Hit
GTAATATTAATAATTTTCATGATTTGAGAAGCCTTCGCTTCGAAGCGAAA1093930.15483500990936702No Hit
GCCTTCGCTTCGAAGCGAAAAGTCCTAATAGTAGAAGAACCCTCCATAAA970460.13735904830898168No Hit
GTGCTATAGGGTAAATACGGGCCCTATTTCAAAGATTTTTAGGGGAATTA964270.13648291481658364No Hit
GTGAGGTAAAATGGCTGAGTGAAGCATTGGACTGTAAATCTAAAGACAGG956470.13537890169207561No Hit
GGCGGATGAAGCAGATAGTGAGGAAAGTTGAGCCAATAATGACGTGAAGT935370.13239240465013727No Hit
GGGCCATGGGGTTGGCTTGAAACCAGCTTTGGGGGGTTCGATTCCTTCCT913170.1292502134496144No Hit
GGAGGCCATGGGGTTGGCTTGAAACCAGCTTTGGGGGGTTCGATTCCTTC905920.1282240474043986No Hit
GAGGCCATGGGGTTGGCTTGAAACCAGCTTTGGGGGGTTCGATTCCTTCC790370.11186908374582141No Hit
GGGTATAATACTAAGTTGAGATGATATCATTTACGGGGGAAGGCGCTTTG759560.10750823190401472No Hit
CCTCGATGTTGGATCAGGACATCCCGATGGTGCAGCCGCTATTAAAGGTT733570.10382960355709632No Hit
GGGGCATCCATATAGTCACTCCAGGTTTATGGAGGGTTCTTCTACTATTA730500.1033950753145015No Hit
ATTTCTCTAACAGCAGTAATATTAATAATTTTCATGATTTGAGAAGCCTT708030.10021466827505338No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)