FastQCFastQC Report
Wed 15 Mar 2023
EGAF00000510332

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000510332
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences67282112
Sequences flagged as poor quality0
Sequence length90
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCGATTCCTTCCTTTTTTGTCTAGATTTTATGTATACGGGCTCTTCGA1200250.17839065456209222No Hit
GGCGGATGAAGCAGATAGTGAGGAAAGTTGAGCCAATAATGACGTGAAGT954610.1418816936067643No Hit
GGGGAATGCTGGAGATTGTAATGGGTATGGAGACATATCATATAAGTAAT694880.10327856533397763No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)