FastQCFastQC Report
Mon 5 Sep 2022
EGAF00000514544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000514544
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences65436801
Sequences flagged as poor quality0
Sequence length90
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN16862942.5769811088411854No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)