FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000515918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000515918
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences86065007
Sequences flagged as poor quality0
Sequence length90
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2060390.23939927176209955No Hit
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1902070.22100387443180014No Hit
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1214420.14110496731848288No Hit
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1028900.11954916822350342No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)