FastQCFastQC Report
Wed 14 Sep 2022
EGAF00000516918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000516918
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences90228187
Sequences flagged as poor quality0
Sequence length90
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN10466241.1599745432100947No Hit
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1144780.12687609471749667No Hit
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1103230.12227110359648477No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)