FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000567980

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000567980
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1806
Sequences flagged as poor quality0
Sequence length100
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACATCTTCATCATGAAATCTTTGCCTGTTCCTATGTCCTGAATGGTATC20.11074197120708748No Hit
TTGAAATCAGGAAGTGTGAGTCTTTCAACTTTATCCTTTCTTTTCAATTT20.11074197120708748No Hit
CAGTACTATTGGAGGATTTAGCATCCACTGGGGGTCTTGGCACATATGCA20.11074197120708748No Hit
GGAATCATCCAATGGAATCGAATGGAATCATCATCATATGGAATTTAGTG20.11074197120708748No Hit
AGTGATGCTTTCTGTTTTTTCACTTAGACTAAGTCATTAAAAACAATTCT20.11074197120708748No Hit
GTCTGTAAAAAAAATTGTTTTAAGTTAGCTAGGTGTAGTGGTGCATGCCT20.11074197120708748No Hit
CAATTTCTGTCTAAACATTTAAATATACATTTGTTACTTTAACTCTAAAA20.11074197120708748No Hit
GAGAGAGAGAAACTTAGGAGGAGCTATAAGAGAAGGTTACAGTTTTAGCT20.11074197120708748No Hit
AATGGGCATACATAGACCACCAACCAAGATCCTTTTAAAAATACTGTAAG20.11074197120708748No Hit
GTTGTCACCACCAGGCCTGCCTTACAAGATCTCCTAAAGGAGGCACTAAA20.11074197120708748No Hit
GTAATAGCCAAGCTAATTAGCTTTGGACCTAGAGATGGCAGAGTTGTATA20.11074197120708748No Hit
TAGGTATTGGAATTTATAAAACTCTATTGAAACAAGTTTTAACACTAACA20.11074197120708748No Hit
CTCATCTAAAAACACAGGTGCTCTGTTGGGCACGGCAGAACAGTCGGGTT20.11074197120708748No Hit
CGTGAGGAAAGTTATAAAGGCATAAAAATGTATGTTAAAAAAATTGCCTG20.11074197120708748No Hit
GAGCCACTGTCATTTCTGATCTCCTGTACGACAAGGAAAGTAACTAACTA20.11074197120708748No Hit
TTGTGAACTTTGATATTTCATGTACAGTATATAATATATATTTGGGGTAC20.11074197120708748No Hit
AAATACATACATCTACTATGTAACCACAGAAATTAAAAATTAAAAAAGAA20.11074197120708748No Hit
AAATTTAAATCCCATTGGCCTGTTCAGTATGATAAATGTCAACAAAATCT20.11074197120708748No Hit
TTTTAAGTCTCTGCCTTCTTGAAGTTCAGTTGTCAGGAACCTCGCTTTTA20.11074197120708748No Hit
GTCAACATTTTAACAAATTAATATGCTTTTAATAAATTTCAGCTTTTAAA20.11074197120708748No Hit
ATTTGTTGAATTAATGAAGAAATACCTCACAAGGTTGCTTTGAGAACTGA20.11074197120708748No Hit
GAAAGGACTTACTATGTTTGCATATTTCTGTTAGTTTTGTAGGCGTATCA20.11074197120708748No Hit
AAGTTTGCATGTCTAAGCAGCTGATATTTTTTCATTGTGGACCATGTGTT20.11074197120708748No Hit
AAGGGAGTTTCCCTTCCTACTATAAAAGTTCTAGGCTTCCCTTTGATAAA20.11074197120708748No Hit
GGCTTCACATTACATTGGTCTCTAATTTTCACTTGCTTCCAAACTTACTA20.11074197120708748No Hit
ACCTAGATGATGGTTTCATAGGTGCAGCAAACCATCATGGCACATGTATA20.11074197120708748No Hit
TTTAATATATCTGTTAAAATCATTTTTAATATTTTAAAATTATATTTAAA20.11074197120708748No Hit
ATATTCTTGATTTATTTTTCTCTGCTCCTATGTAACCCTGAGGATAAGAA20.11074197120708748No Hit
TAATTTGTCTGATATCCCAAATATCTGATGAGGTAAGGATCAGCATTTGT20.11074197120708748No Hit
TTTCTCTGTCTAGTCATCTTTTTTGTTGTTTTACTGAACCATTTGAAAGT20.11074197120708748No Hit
ACTTCTAGGCACATATCAGGATATAAAGAGAAAGAAACTCTGGGAGTGCT20.11074197120708748No Hit
GTCCTTCCCTGGTTGACAATTGTCTATATGCATTGTCATACGTTGTTGCT20.11074197120708748No Hit
GAAATTAGACTGTTACCTCACACCATATACAAATATTAACTCAAAGTGGG20.11074197120708748No Hit
TCATGTTTTGTGGAAGCTATCATATATCCAAATAGAGTTGTCTGACAAGT20.11074197120708748No Hit
TTCCCTTATTATAAATATCTTGAAATACTATGGCACATTTCTTACAATCG20.11074197120708748No Hit
ATAACATAAAAAAAGCATTTTATGGATTATGGATATTTCTGTTCCTGAGG20.11074197120708748No Hit
AAGGACACAGCAGACTTCAGAACCACTGTCAAGCAACCTGACCTAATTGA20.11074197120708748No Hit
AATGGAACGGAATGGAATGGAATGGAATGGAATGGAATGGTATGGAATGG20.11074197120708748No Hit
TCTTGAGTAATACTTTACAAGCACAGGCAACCAAAACCAAAATGGAAAAA20.11074197120708748No Hit
GGCAGATATTTTTTTCCCTTCCAATTATAAGGAGGGTTCTATTTAGGCAA20.11074197120708748No Hit
ATCCTAGAACTTTGGGAGGCCGAGGTGGGTGGATCATTTGAGGTCAGGAG20.11074197120708748No Hit
ATTTTATAAAGGGACTCGGATGTACTACTGAGTACAGGTTAAGTCAGCTG20.11074197120708748No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)