FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000567981

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000567981
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1806
Sequences flagged as poor quality0
Sequence length100
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATGGCTTAAACAAATTTGAAGGATATAAGATTAACATATTAAGACAAAA30.16611295681063123No Hit
GAGGAAATCTTGTCCTAACACCATCTATGAGTTCAGGTTATTAGAATATT20.11074197120708748No Hit
CAGAACATTTGAAAATAACAGTTTATTAATTATGTTTATATCATTTCATA20.11074197120708748No Hit
AAATATCAAAGTACCCAAACTATACATTACATACTGTACATAAAATATGA20.11074197120708748No Hit
AAGGTCTAGCAATCACACTCTTGGTATGAGTATTTACTTAAAATATATGT20.11074197120708748No Hit
AAGATGTCAGAATATCCACTTACAGAATTGACAAACAGACTGTTTCCTAA20.11074197120708748No Hit
TTCCATAATTAATCATTTTTGTCAATAGTTATAAGTGAACAGAGCCATGA20.11074197120708748No Hit
AACTTCTTTCTTTCAGGTTTTCAATGTGGCAACTTAGATCACTTATTTGA20.11074197120708748No Hit
TCAAGAAAAATAAAAGTTAAAAAAAGAATATAAGTCCTAATATTTAATTT20.11074197120708748No Hit
ATTCTACCAGTTTGAGAATTTGCTTAATAATATTCCAGACGTTCAGGTTA20.11074197120708748No Hit
CAAGTCCATGGACAATTATGCTGGCTATATTCTAACAGGTCACAGTCACT20.11074197120708748No Hit
TGTTTATCTTAATTACGCACTTCTCCCATCCTTGAGGCATCTTTTTCATG20.11074197120708748No Hit
GTGATTTATAAAATGCAAGTTAATTGACTGTATTATATTTGAAATCATCT20.11074197120708748No Hit
GAGTAATCAATATCATTAAAATTGCCACATTACCCTAAGCAATTTATAGA20.11074197120708748No Hit
CTTCTTGTTGCATTGATCCCTTTACTATTATGTAATGCCCTTGTCTTTTT20.11074197120708748No Hit
AAAAAAAAAAAAGGAAAATTGGGTTCTACTCAATATTTTGCCTTTTTTCT20.11074197120708748No Hit
ATAGTCATATCATTATCCCTAGGTATTTTAGCTTCTATCTTAAATTCTAA20.11074197120708748No Hit
CTCCATAGTTATACTAATTTACGTTCCCACCAACAGTGTACTAGGGTTCT20.11074197120708748No Hit
ACATAAAGAGAAAAATACAAGTTTAAAATAATTAACCAGAAGAAGACAAC20.11074197120708748No Hit
TAGTTATCTAATATAGAATCTCCAAGTGAGAATATTAAGGCAAATGATAC20.11074197120708748No Hit
ATTCCGTTCCATTCCTTTCCATTCCATTCCATTCTATTCGGGTAAATTCC20.11074197120708748No Hit
GATGTGTGCATTCATTTCACAGAATTGAACCTTTCTTTTGTTTGAACAGT20.11074197120708748No Hit
TATTTCTTCTAGTAGTAACAGAAATATATCAAAGAAAAATACATGAAAAA20.11074197120708748No Hit
ATATTTCTTTATTTCAGGTAATATGATATTTGATAATAAAGAAATTAAAT20.11074197120708748No Hit
CTCAGATTCTTTAACCTTATTAACTGGAAACTTCCACTGCACACACTGAA20.11074197120708748No Hit
GAACACTATTGGATATACCAAATTAACTAAAATAAATAAAAATATTGCCT20.11074197120708748No Hit
ATCATTCACTTAACCAAAGTCATAATTAAAAGATTTTTAAAAACAAAAAC20.11074197120708748No Hit
AAGACTAACAGACTAGGGTTGTAAGTATATCTAAACATTTACTATTGTTA20.11074197120708748No Hit
AAGAGAAATAGAGGGAACAAGATTGACTCTAGGGTTCCTGGCCTGAATAA20.11074197120708748No Hit
AATGGGATAAAACTATTAACATTTATATCCACTCTAAATTGTGTAGATTT20.11074197120708748No Hit
CAAGTAGCTTCCTAATGTTTTCTTCTATTTCTATTGAACTCAGCTGATCG20.11074197120708748No Hit
ATGTTTCCCTGTTTATTCATTATTTATGATTTTATAAGTCTATTTTAATT20.11074197120708748No Hit
TGAACTTCTCTCCAACATTTCTTTGGATGAAGCAACTCAAACCATCCATG20.11074197120708748No Hit
ACTCAGATATATAAAGCAAATAGTATTAGAGCTAAAGAGAGAGTTAGACT20.11074197120708748No Hit
TAGACAAGTCTTTTAACCTATCTGAGCCTGAATTTCTTCATGTATAAAAT20.11074197120708748No Hit
TGAGGTATTTAAAATAGTCAAACATATAAAAAGTAGGCAATAGAATCCTG20.11074197120708748No Hit
CCAGAAACCAATACAATTATTTTAAGGACGTGAGTTCTCAAATGTCAAAA20.11074197120708748No Hit
TTCCTGTTTCTTTCCTCTTTTCCCTAATAATCAATTCCTAATTTTCTACT20.11074197120708748No Hit
TTAGGGAATGCTGATGTCTGGTGTTAATAGAATTTTTTAAAGTTTAAAAG20.11074197120708748No Hit
TCATTGTACAACTCTGTTGGCTACTTGGTTAAATTTATTCTTATTTTATT20.11074197120708748No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)