FastQCFastQC Report
Tue 26 Sep 2023
EGAF00000585239

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000585239
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39406049
Sequences flagged as poor quality0
Sequence length72
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1735320.440368939296604No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)