FastQCFastQC Report
Wed 15 May 2024
EGAF00000602779

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000602779
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences48628587
Total Bases4.6 Gbp
Sequences flagged as poor quality0
Sequence length95
%GC57

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN705890.14515947173213153No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)