FastQCFastQC Report
Thu 9 Feb 2023
EGAF00000611708

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000611708
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105254858
Sequences flagged as poor quality0
Sequence length76
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG1587660.15083959355111193No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA1343650.1276568156122542No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA1279460.12155828474919418No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)