FastQCFastQC Report
Tue 14 Feb 2023
EGAF00000611759

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000611759
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100906119
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG1269560.12581595770222814No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA1128120.111798968306372No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)