FastQCFastQC Report
Fri 23 Dec 2022
EGAF00000625959

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000625959
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences222151379
Sequences flagged as poor quality0
Sequence length101
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN5072830.22835014677086474No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)