Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000639680 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 7127125 |
Total Bases | 534.5 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGC | 571714 | 8.021663714330813 | TruSeq Adapter, Index 2 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATG | 421871 | 5.919231106512092 | TruSeq Adapter, Index 2 (100% over 49bp) |
CGGTGGTAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATC | 15124 | 0.21220337793991265 | TruSeq Adapter, Index 2 (100% over 42bp) |
CTCAGACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGA | 10994 | 0.15425574828559904 | No Hit |