Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000639698 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 68952287 |
Total Bases | 3.4 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATG | 1218801 | 1.7676005438369287 | TruSeq Adapter, Index 2 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGC | 582837 | 0.8452758064427943 | TruSeq Adapter, Index 2 (100% over 50bp) |
CCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCC | 112563 | 0.16324766718760175 | No Hit |
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG | 77182 | 0.11193537351415189 | No Hit |
CTTGGATTAAGGCGACAGCGATTTCTAGGATAGTCAGTAGAATTAGAATT | 72423 | 0.10503349946898788 | No Hit |