Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000639699 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 68952287 |
Total Bases | 3.4 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 1105629 | 1.6034696572138356 | Illumina Single End PCR Primer 1 (100% over 50bp) |
CCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCC | 98753 | 0.14321932498047527 | No Hit |
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG | 74701 | 0.10833723325232127 | No Hit |
CTTGGATTAAGGCGACAGCGATTTCTAGGATAGTCAGTAGAATTAGAATT | 71521 | 0.10372534851527115 | No Hit |