FastQCFastQC Report
Tue 8 Aug 2023
EGAF00000652375

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000652375
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences62103133
Sequences flagged as poor quality0
Sequence length111
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAACTCCTTTTCTTTGCTAAAAGGTATAAAGCTGCTTTTACAGAATGT686990.11062082809896241No Hit
CGAAATGCCAATTTTAAATTTACTGACCATCTGAAGTATGTCATGCTGCC662780.10672247404973915No Hit
CCGGAACTCCTTTTCTTTGCTAAAAGGTATAAAGCTGCTTTTACAGAATG632210.10180001707804338No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)